DiagnosticTables

Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
L_at_Amin_Fem_GP_1 26.4155000 4 10.000 45.000 21.8814000 OK 0.6481120 0.00012957 Normal 26.7812000 10.000 0 OK
L_at_Amax_Fem_GP_1 169.6840000 2 40.000 250.000 196.3410000 OK 1.5054900 0.000104845 Normal 192.4460000 10.000 0 OK
VonBert_K_Fem_GP_1 0.2276280 4 0.050 0.250 0.1087530 OK 0.0191954 9.59905e-05 Normal 0.0676951 0.800 0 OK
Richards_Fem_GP_1 -1.2527700 4 -10.000 10.000 0.2343670 OK 0.2267910 0.0013785 Normal 0.2343670 0.800 0 OK
SD_young_Fem_GP_1 1.5949700 4 0.100 4.000 2.9617800 OK 0.2442470 7.24321e-07 Normal 0.0834877 0.800 0 OK
SD_old_Fem_GP_1 12.8286000 3 0.100 50.000 8.8780000 OK 0.5155030 -1.49357e-05 Normal 1.8157500 0.800 0 OK
SR_LN(R0) 9.5129300 3 3.000 20.000 8.5293800 OK 0.0745982 0.0020529 No_prior NA NA NA OK
SR_regime_BLK1add_16 -0.4514590 2 -5.000 5.000 -0.7047490 OK 0.2470440 0.000286363 Normal 0.0000000 2.500 0 OK
SR_regime_BLK1add_17 -0.4328050 2 -5.000 5.000 -0.7047490 OK 0.1558350 0.000557924 Normal 0.0000000 2.500 0 OK
InitF_seas_1_flt_2A2-LL-n 0.0000000 1 0.000 1.000 0.0968840 LO 0.0000309 1.30817e-08 No_prior NA NA NA CHECK
InitF_seas_1_flt_14A3-OBJ 0.0000000 1 0.000 1.000 0.0002869 LO 0.0000309 -1.07153e-06 No_prior NA NA NA CHECK
LnQ_base_EPO-LL-survey-early(24) -1.8490000 1 -15.000 15.000 0.2911470 OK 0.2756470 0.00141263 No_prior NA NA NA OK
Q_extraSD_EPO-LL-survey-early(24) -0.0472712 2 -1.000 1.000 -0.0024466 OK 0.0153165 2.41357e-05 No_prior NA NA NA OK
LnQ_base_EPO-LL-survey-late(25) -1.7154500 1 -15.000 15.000 0.2598620 OK 0.2922920 0.000503301 No_prior NA NA NA OK
SizeSpline_GradLo_A1-LL-n(1) -0.0002989 3 -0.001 1.000 -0.0002488 LO 0.0252673 -1.63457e-07 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_GradHi_A1-LL-n(1) -0.1616610 3 -1.000 0.001 -0.2297910 OK 0.0995555 7.81148e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A1-LL-n(1) -3.1839400 2 -9.000 7.000 -3.5936900 OK 1.0897700 -1.5212e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A1-LL-n(1) 0.5885030 2 -9.000 7.000 0.7114940 OK 0.5628560 1.4849e-06 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A2-LL-n(2) 140.6070000 2 20.000 199.000 175.0020000 OK 5.6211800 1.14648e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2) 6.9936700 3 -15.000 15.000 7.5641700 OK 0.1797670 -2.4117e-05 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3) 129.8820000 2 20.000 199.000 149.7520000 OK 3.4658800 8.01207e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3) -10.4947000 3 -15.000 15.000 -1.1705900 OK 65.4298000 3.55793e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3) 6.4954700 3 -15.000 15.000 7.0019700 OK 0.1781270 -6.52232e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3) 7.7605700 3 -15.000 15.000 6.7549300 OK 0.2700110 4.80186e-06 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4) 124.3730000 2 20.000 199.000 166.8480000 OK 4.6385000 4.49433e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4) 4.6619300 3 -15.000 15.000 -1.3043000 OK 140.3230000 4.01447e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4) 6.5864600 3 -15.000 15.000 7.5892000 OK 0.1998220 -1.9082e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4) 6.3394200 3 -15.000 15.000 6.9103900 OK 133.7070000 9.66033e-08 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5) 138.4900000 2 20.000 199.000 161.0020000 OK 3.3413700 8.62122e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5) -10.9198000 3 -15.000 15.000 -9.8290200 OK 61.0753000 -2.24141e-09 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5) 6.8866200 3 -15.000 15.000 7.2693700 OK 0.1326010 -1.98088e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5) 7.8015600 3 -15.000 15.000 7.0943400 OK 0.3113610 6.24696e-06 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6) 120.1110000 2 20.000 199.000 126.5040000 OK 2.0809200 1.32866e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6) -11.9744000 3 -15.000 15.000 -11.2735000 OK 49.7482000 1.23666e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6) 6.2294500 3 -15.000 15.000 6.4165200 OK 0.1381390 -7.94874e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6) 6.7148900 3 -15.000 15.000 7.1019100 OK 0.1464240 4.79018e-06 No_prior NA NA NA OK
Size_DblN_peak_A2-OBJ(13) 44.4285000 2 20.000 199.000 42.9317000 OK 0.8951540 6.48919e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A2-OBJ(13) -12.6742000 3 -15.000 15.000 -12.6847000 OK 41.5235000 -2.34497e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-OBJ(13) 4.0337600 3 -15.000 15.000 3.8106700 OK 0.1997410 -2.46804e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A2-OBJ(13) 7.5029200 3 -15.000 15.000 7.7248100 OK 0.0866322 0.000182331 No_prior NA NA NA OK
Size_DblN_peak_A3-OBJ(14) 50.7255000 2 20.000 199.000 50.4889000 OK 2.2514800 3.82165e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A3-OBJ(14) -0.6273290 3 -15.000 15.000 -0.3627170 OK 0.1455400 0.000175463 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-OBJ(14) 4.7541300 3 -15.000 15.000 4.7803300 OK 0.3195080 -3.11881e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A3-OBJ(14) 6.2422300 3 -15.000 15.000 5.9557500 OK 0.3685910 5.27701e-05 No_prior NA NA NA OK
Size_DblN_peak_A4-OBJ(15) 53.3854000 2 20.000 199.000 53.2223000 OK 2.2816700 5.05556e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A4-OBJ(15) -11.5164000 3 -15.000 15.000 -11.5603000 OK 54.7819000 6.82153e-08 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-OBJ(15) 4.7872200 3 -15.000 15.000 4.7623400 OK 0.3302990 -3.98013e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-OBJ(15) 6.3387300 3 -15.000 15.000 6.3711300 OK 0.2951320 6.27121e-06 No_prior NA NA NA OK
SizeSpline_GradLo_A5-OBJ(16) 0.6097840 3 -0.001 1.000 0.6111100 OK 0.0371765 2.83713e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A5-OBJ(16) 0.0003484 3 -1.000 0.001 -0.0762291 HI 0.0233394 -3.34875e-07 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_Val_1_A5-OBJ(16) -8.9987000 2 -9.000 7.000 -8.9987900 LO 0.0441346 -1.779e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A5-OBJ(16) 0.3146030 2 -9.000 7.000 0.2276060 OK 0.3052990 -9.98623e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A5-OBJ(16) -0.2353970 2 -9.000 7.000 0.1508790 OK 0.3269600 5.78365e-06 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A6-OBJ(17) 93.2026000 2 20.000 199.000 115.7290000 OK 14.1651000 2.51937e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A6-OBJ(17) -1.3244600 3 -15.000 15.000 -1.5790300 OK 0.9615140 3.1723e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-OBJ(17) 6.7741500 3 -15.000 15.000 7.4926300 OK 0.6325160 -2.04734e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-OBJ(17) 6.7516900 3 -15.000 15.000 6.7459200 OK 0.8232560 5.74766e-07 No_prior NA NA NA OK
SizeSpline_GradLo_A2-NOADEL(19) 0.8210860 3 -0.001 1.000 0.8658560 OK 0.4479360 -3.30577e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A2-NOADEL(19) -0.3210020 3 -1.000 0.001 -0.4704060 OK 0.2618350 -2.44893e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_1_A2-NOADEL(19) -8.8915100 2 -9.000 7.000 -8.9129500 LO 3.3579500 1.29067e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A2-NOADEL(19) 0.8846620 2 -9.000 7.000 0.8508310 OK 1.5542100 -1.2688e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A2-NOADEL(19) 0.9361920 2 -9.000 7.000 1.5249200 OK 1.8145400 1.3841e-06 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A3-NOADEL(20) 95.9507000 2 20.000 199.000 101.8980000 OK 14.7933000 1.21218e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A3-NOADEL(20) -2.1055900 3 -15.000 15.000 -2.2875400 OK 1.5961800 1.20489e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-NOADEL(20) 7.2827800 3 -15.000 15.000 7.4569200 OK 0.6119780 -1.5398e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A3-NOADEL(20) 6.3890800 3 -15.000 15.000 6.5508500 OK 0.6443940 1.42587e-05 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-early(24) 126.3630000 2 20.000 199.000 169.6480000 OK 4.9966000 -8.64223e-05 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-early(24) -1.6608900 3 -15.000 15.000 -9.1938900 OK 1.1592600 8.42336e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-early(24) 6.2813600 3 -15.000 15.000 7.4523700 OK 0.2878570 0.000244028 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-early(24) 7.9510500 3 -15.000 15.000 6.0058300 OK 0.7554340 8.74217e-05 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-late(25) 141.0040000 2 20.000 199.000 169.1050000 OK 3.1607900 -1.94015e-05 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-late(25) -10.2898000 3 -15.000 15.000 -10.6900000 OK 67.4983000 1.91366e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-late(25) 6.9479300 3 -15.000 15.000 7.4117800 OK 0.0956024 8.36435e-05 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-late(25) 8.5954300 3 -15.000 15.000 6.3715000 OK 0.3894480 2.41037e-05 No_prior NA NA NA OK
Size_DblN_peak_A2-LL-n(2)_BLK2repl_17 124.1050000 2 20.000 199.000 178.1730000 OK 5.2147800 9.80933e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A2-LL-n(2)_BLK2repl_17 -0.5303170 3 -15.000 15.000 -10.4270000 OK 0.3758280 4.65767e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2)_BLK2repl_17 6.3544700 3 -15.000 15.000 7.6886400 OK 0.2966780 -2.20234e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A2-LL-n(2)_BLK2repl_17 7.4063200 3 -15.000 15.000 5.2776000 OK 0.8117370 3.59943e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3)_BLK2repl_17 141.7860000 2 20.000 199.000 165.9000000 OK 6.5880900 3.97404e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3)_BLK2repl_17 -2.4150000 3 -15.000 15.000 -9.6241100 OK 2.1467100 3.78355e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3)_BLK2repl_17 6.9073600 3 -15.000 15.000 7.2852400 OK 0.2848750 -9.10209e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3)_BLK2repl_17 6.6250300 3 -15.000 15.000 5.4009300 OK 0.7020950 6.92163e-07 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4)_BLK2repl_17 115.8800000 2 20.000 199.000 163.8220000 OK 8.2561600 1.11487e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4)_BLK2repl_17 -1.6679600 3 -15.000 15.000 -1.8116900 OK 2.4048500 4.4486e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4)_BLK2repl_17 5.9988700 3 -15.000 15.000 7.5732300 OK 0.5863180 -1.11978e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4)_BLK2repl_17 8.2822500 3 -15.000 15.000 6.3611800 OK 1.3756500 9.31622e-06 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5)_BLK2repl_17 137.2600000 2 20.000 199.000 149.6190000 OK 3.4069700 -1.14558e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 -10.6184000 3 -15.000 15.000 -10.2978000 OK 64.1706000 -1.39741e-08 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5)_BLK2repl_17 6.6387700 3 -15.000 15.000 6.8287000 OK 0.2123970 -1.47239e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5)_BLK2repl_17 6.4529500 3 -15.000 15.000 6.3689100 OK 0.3103130 3.31219e-06 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6)_BLK2repl_17 106.9080000 2 20.000 199.000 120.1350000 OK 6.9427100 1.175e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6)_BLK2repl_17 -2.3848600 3 -15.000 15.000 -9.4204000 OK 1.2432600 2.6164e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6)_BLK2repl_17 5.3557100 3 -15.000 15.000 6.2344200 OK 0.7086270 -2.07184e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6)_BLK2repl_17 6.6771200 3 -15.000 15.000 7.0695400 OK 0.3871350 1.60875e-05 No_prior NA NA NA OK

Table of estimated parameters sorted by parameters with the largest gradients; any parameter with a gradient value with an absolute value above 0.001 (for SS 3.30 models) or a parameter on bounds is colored in red.
file: parameterchecks.html

label.i label.j corr
1 Richards_Fem_GP_1 VonBert_K_Fem_GP_1 -0.976452
3 Size_DblN_ascend_se_A3-OBJ(14) Size_DblN_peak_A3-OBJ(14) 0.950577
4 Size_DblN_ascend_se_A6-OBJ(17) Size_DblN_peak_A6-OBJ(17) 0.955022
2 Size_DblN_ascend_se_A2-LL-n(2) Size_DblN_peak_A2-LL-n(2) 0.965971

Table of estimated parameters with the ten highest correlation rates, sorted by highest correlations; any parameter with an absolute value of correlation above is colored in red.
file: correlationcheck.html

name max
198 Size_DblN_top_logit_A4-LL-n(4) 0.000238356
182 InitF_seas_1_flt_2A2-LL-n 0.000520466
206 Size_DblN_top_logit_A6-LL-n(6) 0.000590471
187 SizeSpline_GradLo_A1-LL-n(1) 0.000635627
260 Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 0.000689157
200 Size_DblN_descend_se_A4-LL-n(4) 0.000839962
183 InitF_seas_1_flt_14A3-OBJ 0.000892283
218 Size_DblN_top_logit_A4-OBJ(15) 0.00114671
202 Size_DblN_top_logit_A5-LL-n(5) 0.00121188
210 Size_DblN_top_logit_A2-OBJ(13) 0.00137602

Table of estimated parameters with the ten lowest correlation rates, sorted by lowest correlations; any parameter with an absolute value of correlation below is colored in purple
file: lowcorrelationcheck.html