DiagnosticTables

Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
L_at_Amin_Fem_GP_1 26.4358000 4 10.000 45.000 21.8814000 OK 0.6196840 1.67615e-06 Normal 26.7812000 10.000 0 OK
L_at_Amax_Fem_GP_1 169.8760000 2 40.000 250.000 196.3410000 OK 1.3533900 -7.82156e-07 Normal 192.4460000 10.000 0 OK
VonBert_K_Fem_GP_1 0.2263750 4 0.050 0.250 0.1087530 OK 0.0169959 7.34273e-07 Normal 0.0676951 0.800 0 OK
Richards_Fem_GP_1 -1.2389200 4 -10.000 10.000 0.2343670 OK 0.2045290 9.19901e-07 Normal 0.2343670 0.800 0 OK
SD_young_Fem_GP_1 1.5625000 4 0.100 4.000 2.9617800 OK 0.2294600 1.2825e-06 Normal 0.0834877 0.800 0 OK
SD_old_Fem_GP_1 12.7756000 3 0.100 50.000 8.8780000 OK 0.4850550 -5.82694e-06 Normal 1.8157500 0.800 0 OK
SR_LN(R0) 9.2679000 1 3.000 20.000 8.5293800 OK 0.1041720 -1.47754e-05 No_prior NA NA NA OK
SR_regime_BLK1add_16 -0.2624650 2 -5.000 5.000 -0.7047490 OK 0.1789100 1.79663e-05 Normal 0.0000000 2.500 0 OK
SR_regime_BLK1add_17 -0.3234400 2 -5.000 5.000 -0.7047490 OK 0.1296190 2.14835e-06 Normal 0.0000000 2.500 0 OK
InitF_seas_1_flt_2A2-LL-n 0.0000000 1 0.000 1.000 0.0968840 LO 0.0000349 -1.10164e-06 No_prior NA NA NA CHECK
InitF_seas_1_flt_14A3-OBJ 0.0000000 1 0.000 1.000 0.0002869 LO 0.0000337 8.83073e-06 No_prior NA NA NA CHECK
LnQ_base_EPO-LL-survey-early(24) -1.7931800 1 -15.000 15.000 0.2911470 OK 0.2414820 2.20158e-05 No_prior NA NA NA OK
Q_extraSD_EPO-LL-survey-early(24) -0.0468628 2 -1.000 1.000 -0.0024466 OK 0.0155657 -6.97431e-06 No_prior NA NA NA OK
LnQ_base_EPO-LL-survey-late(25) -1.6593800 1 -15.000 15.000 0.2598620 OK 0.2545070 -2.93636e-06 No_prior NA NA NA OK
SizeSpline_GradLo_A1-LL-n(1) -0.0003022 3 -0.001 1.000 -0.0002488 LO 0.0251641 4.1398e-06 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_GradHi_A1-LL-n(1) -0.1631310 3 -1.000 0.001 -0.2297910 OK 0.0993531 3.73984e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A1-LL-n(1) -3.1953900 2 -9.000 7.000 -3.5936900 OK 1.0897900 1.45585e-05 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A1-LL-n(1) 0.5913760 2 -9.000 7.000 0.7114940 OK 0.5625220 -1.07036e-05 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A2-LL-n(2) 141.3250000 2 20.000 199.000 175.0020000 OK 4.0420000 -1.61316e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2) 7.0115400 3 -15.000 15.000 7.5641700 OK 0.1305020 9.15128e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3) 130.1770000 2 20.000 199.000 149.7520000 OK 3.3467000 3.57455e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3) -10.4616000 3 -15.000 15.000 -1.1705900 OK 65.7627000 6.50687e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3) 6.5035900 3 -15.000 15.000 7.0019700 OK 0.1749090 7.67138e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3) 7.7606000 3 -15.000 15.000 6.7549300 OK 0.2733630 -2.99598e-05 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4) 124.9480000 2 20.000 199.000 166.8480000 OK 4.2291900 -3.00374e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4) 4.6486300 3 -15.000 15.000 -1.3043000 OK 140.3360000 -4.89103e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4) 6.6048700 3 -15.000 15.000 7.5892000 OK 0.1853850 -6.88199e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4) 6.3502400 3 -15.000 15.000 6.9103900 OK 133.8560000 5.68648e-06 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5) 138.8100000 2 20.000 199.000 161.0020000 OK 3.1620700 3.76287e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5) -10.9327000 3 -15.000 15.000 -9.8290200 OK 60.9462000 -5.1035e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5) 6.8915800 3 -15.000 15.000 7.2693700 OK 0.1296460 8.04834e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5) 7.7963300 3 -15.000 15.000 7.0943400 OK 0.3131920 -4.66814e-05 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6) 120.2500000 2 20.000 199.000 126.5040000 OK 2.0436700 1.47874e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6) -11.9712000 3 -15.000 15.000 -11.2735000 OK 49.7830000 3.45018e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6) 6.2327500 3 -15.000 15.000 6.4165200 OK 0.1369810 3.0708e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6) 6.7162500 3 -15.000 15.000 7.1019100 OK 0.1468360 -6.76414e-06 No_prior NA NA NA OK
Size_DblN_peak_A2-OBJ(13) 44.4623000 2 20.000 199.000 42.9317000 OK 0.8960930 3.20652e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A2-OBJ(13) -12.6589000 3 -15.000 15.000 -12.6847000 OK 41.7123000 -1.7126e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-OBJ(13) 4.0355000 3 -15.000 15.000 3.8106700 OK 0.1991230 3.34447e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A2-OBJ(13) 7.5114800 3 -15.000 15.000 7.7248100 OK 0.0860735 -1.14071e-05 No_prior NA NA NA OK
Size_DblN_peak_A3-OBJ(14) 50.8543000 2 20.000 199.000 50.4889000 OK 2.2499300 1.47065e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A3-OBJ(14) -0.6214040 3 -15.000 15.000 -0.3627170 OK 0.1431460 -2.33863e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-OBJ(14) 4.7653600 3 -15.000 15.000 4.7803300 OK 0.3173690 1.01205e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A3-OBJ(14) 6.2340600 3 -15.000 15.000 5.9557500 OK 0.3680120 -8.29768e-06 No_prior NA NA NA OK
Size_DblN_peak_A4-OBJ(15) 53.4374000 2 20.000 199.000 53.2223000 OK 2.2863600 4.81905e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A4-OBJ(15) -11.5097000 3 -15.000 15.000 -11.5603000 OK 54.8547000 -4.20561e-10 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-OBJ(15) 4.7903000 3 -15.000 15.000 4.7623400 OK 0.3301750 3.52444e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A4-OBJ(15) 6.3426000 3 -15.000 15.000 6.3711300 OK 0.2967040 3.58026e-06 No_prior NA NA NA OK
SizeSpline_GradLo_A5-OBJ(16) 0.6076430 3 -0.001 1.000 0.6111100 OK 0.0370642 1.21057e-05 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A5-OBJ(16) 0.0002797 3 -1.000 0.001 -0.0762291 HI 0.0253906 1.02598e-06 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_Val_1_A5-OBJ(16) -8.9987000 2 -9.000 7.000 -8.9987900 LO 0.0441914 -4.58902e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A5-OBJ(16) 0.3033480 2 -9.000 7.000 0.2276060 OK 0.3050430 -1.78455e-05 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A5-OBJ(16) -0.2245000 2 -9.000 7.000 0.1508790 OK 0.3259320 -1.14516e-05 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A6-OBJ(17) 93.5978000 2 20.000 199.000 115.7290000 OK 14.0977000 3.77859e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A6-OBJ(17) -1.3276200 3 -15.000 15.000 -1.5790300 OK 0.9611610 1.7906e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-OBJ(17) 6.7824100 3 -15.000 15.000 7.4926300 OK 0.6250180 -5.19788e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-OBJ(17) 6.7496600 3 -15.000 15.000 6.7459200 OK 0.8235530 1.72802e-06 No_prior NA NA NA OK
SizeSpline_GradLo_A2-NOADEL(19) 0.8187720 3 -0.001 1.000 0.8658560 OK 0.4512930 2.65113e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A2-NOADEL(19) -0.3236710 3 -1.000 0.001 -0.4704060 OK 0.2614190 -4.07483e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_1_A2-NOADEL(19) -8.8903900 2 -9.000 7.000 -8.9129500 LO 3.3923800 -8.16106e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A2-NOADEL(19) 0.8719570 2 -9.000 7.000 0.8508310 OK 1.5544900 1.22276e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A2-NOADEL(19) 0.9587850 2 -9.000 7.000 1.5249200 OK 1.8146700 6.32129e-06 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A3-NOADEL(20) 96.2680000 2 20.000 199.000 101.8980000 OK 14.8063000 4.85032e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A3-NOADEL(20) -2.1217400 3 -15.000 15.000 -2.2875400 OK 1.6229900 1.05643e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-NOADEL(20) 7.2875100 3 -15.000 15.000 7.4569200 OK 0.6084980 6.89429e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-NOADEL(20) 6.3911500 3 -15.000 15.000 6.5508500 OK 0.6448240 1.31396e-05 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-early(24) 126.7270000 2 20.000 199.000 169.6480000 OK 4.9097700 -5.5646e-06 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-early(24) -1.6535600 3 -15.000 15.000 -9.1938900 OK 1.2354600 -1.98564e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-early(24) 6.2947900 3 -15.000 15.000 7.4523700 OK 0.2835810 -3.3553e-06 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-early(24) 7.9394000 3 -15.000 15.000 6.0058300 OK 0.8037870 -5.02528e-06 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-late(25) 141.4230000 2 20.000 199.000 169.1050000 OK 2.7548800 -2.75159e-05 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-late(25) -10.3215000 3 -15.000 15.000 -10.6900000 OK 67.1907000 -9.41774e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-late(25) 6.9561300 3 -15.000 15.000 7.4117800 OK 0.0868675 -1.53151e-05 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-late(25) 8.5854500 3 -15.000 15.000 6.3715000 OK 0.3904030 2.30202e-05 No_prior NA NA NA OK
Size_DblN_peak_A2-LL-n(2)_BLK2repl_17 124.5440000 2 20.000 199.000 178.1730000 OK 5.0579200 -1.06459e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A2-LL-n(2)_BLK2repl_17 -0.5400350 3 -15.000 15.000 -10.4270000 OK 0.3759540 2.3722e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2)_BLK2repl_17 6.3715200 3 -15.000 15.000 7.6886400 OK 0.2884230 -5.31044e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A2-LL-n(2)_BLK2repl_17 7.4071100 3 -15.000 15.000 5.2776000 OK 0.8126960 7.0969e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3)_BLK2repl_17 142.0020000 2 20.000 199.000 165.9000000 OK 6.5395600 1.43886e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3)_BLK2repl_17 -2.4274000 3 -15.000 15.000 -9.6241100 OK 2.1671600 6.25675e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3)_BLK2repl_17 6.9091600 3 -15.000 15.000 7.2852400 OK 0.2835520 6.45563e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3)_BLK2repl_17 6.6170700 3 -15.000 15.000 5.4009300 OK 0.7000790 1.56208e-05 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4)_BLK2repl_17 116.2320000 2 20.000 199.000 163.8220000 OK 8.1360600 1.05735e-05 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4)_BLK2repl_17 -1.6208900 3 -15.000 15.000 -1.8116900 OK 2.2672200 1.76088e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4)_BLK2repl_17 6.0177400 3 -15.000 15.000 7.5732300 OK 0.5733020 1.10697e-05 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4)_BLK2repl_17 8.2548800 3 -15.000 15.000 6.3611800 OK 1.3731100 2.6614e-05 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5)_BLK2repl_17 137.3930000 2 20.000 199.000 149.6190000 OK 3.3659600 4.375e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 -10.6285000 3 -15.000 15.000 -10.2978000 OK 64.0699000 -2.36636e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5)_BLK2repl_17 6.6392200 3 -15.000 15.000 6.8287000 OK 0.2111150 7.01018e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5)_BLK2repl_17 6.4485100 3 -15.000 15.000 6.3689100 OK 0.3105940 9.71824e-06 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6)_BLK2repl_17 107.6370000 2 20.000 199.000 120.1350000 OK 16.1095000 1.62921e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6)_BLK2repl_17 -2.4773300 3 -15.000 15.000 -9.4204000 OK 2.6329800 -8.34202e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6)_BLK2repl_17 5.4210300 3 -15.000 15.000 6.2344200 OK 1.5109600 -9.92222e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6)_BLK2repl_17 6.6832400 3 -15.000 15.000 7.0695400 OK 0.4031390 4.10918e-06 No_prior NA NA NA OK

Table of estimated parameters sorted by parameters with the largest gradients; any parameter with a gradient value with an absolute value above 0.001 (for SS 3.30 models) or a parameter on bounds is colored in red.
file: parameterchecks.html

label.i label.j corr
1 Richards_Fem_GP_1 VonBert_K_Fem_GP_1 -0.971273
2 Size_DblN_ascend_se_A3-OBJ(14) Size_DblN_peak_A3-OBJ(14) 0.950597
3 Size_DblN_ascend_se_A6-OBJ(17) Size_DblN_peak_A6-OBJ(17) 0.954854
4 Size_DblN_ascend_se_A6-LL-n(6)_BLK2repl_17 Size_DblN_peak_A6-LL-n(6)_BLK2repl_17 0.988444

Table of estimated parameters with the ten highest correlation rates, sorted by highest correlations; any parameter with an absolute value of correlation above is colored in red.
file: correlationcheck.html

name max
197 Size_DblN_top_logit_A4-LL-n(4) 0.000209511
205 Size_DblN_top_logit_A6-LL-n(6) 0.000499532
259 Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 0.000585094
186 SizeSpline_GradLo_A1-LL-n(1) 0.00074181
181 InitF_seas_1_flt_2A2-LL-n 0.000861684
199 Size_DblN_descend_se_A4-LL-n(4) 0.000877646
201 Size_DblN_top_logit_A5-LL-n(5) 0.00114618
217 Size_DblN_top_logit_A4-OBJ(15) 0.00115737
182 InitF_seas_1_flt_14A3-OBJ 0.00140877
209 Size_DblN_top_logit_A2-OBJ(13) 0.00141637

Table of estimated parameters with the ten lowest correlation rates, sorted by lowest correlations; any parameter with an absolute value of correlation below is colored in purple
file: lowcorrelationcheck.html