DiagnosticTables

Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
L_at_Amin_Fem_GP_1 26.5278000 4 10.000 45.000 21.8814000 OK 0.6186140 -5.51169e-07 Normal 26.7812000 10.000 0 OK
L_at_Amax_Fem_GP_1 168.5090000 2 40.000 250.000 196.3410000 OK 1.3203800 -4.16807e-06 Normal 192.4460000 10.000 0 OK
VonBert_K_Fem_GP_1 0.2356250 4 0.050 0.250 0.1087530 OK 0.0195245 -6.71007e-07 Normal 0.0676951 0.800 0 OK
Richards_Fem_GP_1 -1.3352700 4 -10.000 10.000 0.2343670 OK 0.2280740 -5.63425e-06 Normal 0.2343670 0.800 0 OK
SD_young_Fem_GP_1 1.5320800 4 0.100 4.000 2.9617800 OK 0.2348610 -4.80488e-07 Normal 0.0834877 0.800 0 OK
SD_old_Fem_GP_1 13.1606000 3 0.100 50.000 8.8780000 OK 0.4784420 4.46009e-07 Normal 1.8157500 0.800 0 OK
SR_LN(R0) 9.3948900 1 3.000 20.000 8.5293800 OK 0.1605230 5.49847e-06 No_prior NA NA NA OK
SR_regime_BLK1add_16 0.0345270 2 -5.000 5.000 -0.7047490 OK 0.1478550 5.81659e-06 Normal 0.0000000 2.500 0 OK
InitF_seas_1_flt_2A2-LL-n 0.0000000 1 0.000 1.000 0.0968840 LO 0.0000289 1.83996e-05 No_prior NA NA NA CHECK
InitF_seas_1_flt_14A3-OBJ 0.0000000 1 0.000 1.000 0.0002869 LO 0.0000274 -2.88362e-05 No_prior NA NA NA CHECK
LnQ_base_EPO-LL-survey-early(24) -2.2560700 1 -15.000 15.000 0.2911470 OK 0.2542310 6.77374e-06 No_prior NA NA NA OK
Q_extraSD_EPO-LL-survey-early(24) -0.0436262 2 -1.000 1.000 -0.0024466 OK 0.0160761 1.64926e-07 No_prior NA NA NA OK
LnQ_base_EPO-LL-survey-late(25) -2.1243400 1 -15.000 15.000 0.2598620 OK 0.2758340 5.14313e-07 No_prior NA NA NA OK
SizeSpline_GradLo_A1-LL-n(1) -0.0002742 3 -0.001 1.000 -0.0002488 LO 0.0260471 2.17391e-08 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_GradHi_A1-LL-n(1) -0.1526900 3 -1.000 0.001 -0.2297910 OK 0.0995922 5.69348e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A1-LL-n(1) -3.1209900 2 -9.000 7.000 -3.5936900 OK 1.0884000 -9.72131e-08 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A1-LL-n(1) 0.5694850 2 -9.000 7.000 0.7114940 OK 0.5641200 -8.22457e-07 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A2-LL-n(2) 135.5760000 2 20.000 199.000 175.0020000 OK 4.7896800 -1.70141e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2) 6.8510000 3 -15.000 15.000 7.5641700 OK 0.1800890 -1.2199e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3) 128.0620000 2 20.000 199.000 149.7520000 OK 3.0755300 -3.79658e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3) -10.6614000 3 -15.000 15.000 -1.1705900 OK 63.7356000 -3.96455e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3) 6.4469700 3 -15.000 15.000 7.0019700 OK 0.1734860 -1.14743e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3) 7.7641700 3 -15.000 15.000 6.7549300 OK 0.2466020 2.77127e-06 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4) 120.6980000 2 20.000 199.000 166.8480000 OK 4.7804000 3.04265e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4) 4.7019700 3 -15.000 15.000 -1.3043000 OK 139.8560000 2.51239e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4) 6.4599800 3 -15.000 15.000 7.5892000 OK 0.2352980 1.5614e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4) 6.4280600 3 -15.000 15.000 6.9103900 OK 132.1480000 -2.18194e-07 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5) 136.5160000 2 20.000 199.000 161.0020000 OK 3.1224800 -1.62371e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5) -10.8543000 3 -15.000 15.000 -9.8290200 OK 61.7507000 1.08589e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5) 6.8557300 3 -15.000 15.000 7.2693700 OK 0.1361380 2.98347e-07 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5) 7.8372500 3 -15.000 15.000 7.0943400 OK 0.2965260 2.13793e-06 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6) 119.2050000 2 20.000 199.000 126.5040000 OK 2.0184400 3.61104e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6) -11.9946000 3 -15.000 15.000 -11.2735000 OK 49.5209000 2.54594e-08 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6) 6.2067900 3 -15.000 15.000 6.4165200 OK 0.1408930 1.2866e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6) 6.7075900 3 -15.000 15.000 7.1019100 OK 0.1420150 -2.03899e-06 No_prior NA NA NA OK
Size_DblN_peak_A2-OBJ(13) 44.1458000 2 20.000 199.000 42.9317000 OK 0.8723300 -2.06424e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A2-OBJ(13) -12.7501000 3 -15.000 15.000 -12.6847000 OK 40.5817000 -4.83023e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-OBJ(13) 3.9924500 3 -15.000 15.000 3.8106700 OK 0.1995250 9.00589e-08 No_prior NA NA NA OK
Size_DblN_descend_se_A2-OBJ(13) 7.4615700 3 -15.000 15.000 7.7248100 OK 0.0821615 1.89696e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-OBJ(14) 49.8939000 2 20.000 199.000 50.4889000 OK 2.1960900 4.88508e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A3-OBJ(14) -0.6664990 3 -15.000 15.000 -0.3627170 OK 0.1515370 -1.25814e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-OBJ(14) 4.6726600 3 -15.000 15.000 4.7803300 OK 0.3285950 2.37643e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-OBJ(14) 6.2993300 3 -15.000 15.000 5.9557500 OK 0.3637980 1.23027e-05 No_prior NA NA NA OK
Size_DblN_peak_A4-OBJ(15) 53.1017000 2 20.000 199.000 53.2223000 OK 2.2644900 -9.80741e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A4-OBJ(15) -11.5372000 3 -15.000 15.000 -11.5603000 OK 54.5578000 9.2004e-09 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-OBJ(15) 4.7735100 3 -15.000 15.000 4.7623400 OK 0.3344500 -1.39133e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-OBJ(15) 6.3296300 3 -15.000 15.000 6.3711300 OK 0.2885590 1.06145e-06 No_prior NA NA NA OK
SizeSpline_GradLo_A5-OBJ(16) 0.6229320 3 -0.001 1.000 0.6111100 OK 0.0369301 -3.36385e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A5-OBJ(16) 0.0006062 3 -1.000 0.001 -0.0762291 HI 0.0154784 -3.00765e-07 Sym_Beta 0.0000000 0.001 0 CHECK
SizeSpline_Val_1_A5-OBJ(16) -8.9987100 2 -9.000 7.000 -8.9987900 LO 0.0440952 8.54479e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A5-OBJ(16) 0.3861050 2 -9.000 7.000 0.2276060 OK 0.3038390 4.90209e-06 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A5-OBJ(16) -0.2995880 2 -9.000 7.000 0.1508790 OK 0.3244490 -1.15273e-06 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A6-OBJ(17) 91.5438000 2 20.000 199.000 115.7290000 OK 13.1440000 -4.20741e-08 No_prior NA NA NA OK
Size_DblN_top_logit_A6-OBJ(17) -1.3298300 3 -15.000 15.000 -1.5790300 OK 0.8950380 3.07489e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-OBJ(17) 6.7482000 3 -15.000 15.000 7.4926300 OK 0.6136950 -7.0094e-07 No_prior NA NA NA OK
Size_DblN_descend_se_A6-OBJ(17) 6.7587900 3 -15.000 15.000 6.7459200 OK 0.7766870 -1.86928e-07 No_prior NA NA NA OK
SizeSpline_GradLo_A2-NOADEL(19) 0.8311250 3 -0.001 1.000 0.8658560 OK 0.4575230 -2.89839e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_GradHi_A2-NOADEL(19) -0.3074940 3 -1.000 0.001 -0.4704060 OK 0.2634460 2.30577e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_1_A2-NOADEL(19) -8.8881400 2 -9.000 7.000 -8.9129500 LO 3.4575700 5.86492e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_2_A2-NOADEL(19) 0.9417530 2 -9.000 7.000 0.8508310 OK 1.5528400 -4.59404e-07 Sym_Beta 0.0000000 0.001 0 OK
SizeSpline_Val_4_A2-NOADEL(19) 0.8243370 2 -9.000 7.000 1.5249200 OK 1.8104300 5.56891e-07 Sym_Beta 0.0000000 0.001 0 OK
Size_DblN_peak_A3-NOADEL(20) 94.2219000 2 20.000 199.000 101.8980000 OK 14.9781000 8.09084e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A3-NOADEL(20) -2.0321100 3 -15.000 15.000 -2.2875400 OK 1.4446900 1.97772e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-NOADEL(20) 7.2746900 3 -15.000 15.000 7.4569200 OK 0.6487660 -2.34655e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A3-NOADEL(20) 6.3770600 3 -15.000 15.000 6.5508500 OK 0.6029410 -1.85608e-06 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-early(24) 124.4100000 2 20.000 199.000 169.6480000 OK 4.8673700 -3.06894e-06 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-early(24) -1.7543000 3 -15.000 15.000 -9.1938900 OK 1.2592100 6.78573e-08 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-early(24) 6.2062500 3 -15.000 15.000 7.4523700 OK 0.3000520 -5.50087e-08 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-early(24) 8.0376600 3 -15.000 15.000 6.0058300 OK 0.7277610 1.2942e-06 No_prior NA NA NA OK
Size_DblN_peak_EPO-LL-survey-late(25) 138.1900000 2 20.000 199.000 169.1050000 OK 2.7830700 2.02816e-06 No_prior NA NA NA OK
Size_DblN_top_logit_EPO-LL-survey-late(25) -9.7275100 3 -15.000 15.000 -10.6900000 OK 73.0522000 4.3442e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_EPO-LL-survey-late(25) 6.8876000 3 -15.000 15.000 7.4117800 OK 0.0970027 -1.98006e-06 No_prior NA NA NA OK
Size_DblN_descend_se_EPO-LL-survey-late(25) 8.6772100 3 -15.000 15.000 6.3715000 OK 0.3741720 -2.09075e-06 No_prior NA NA NA OK
Size_DblN_peak_A2-LL-n(2)_BLK2repl_17 121.9270000 2 20.000 199.000 178.1730000 OK 4.3476900 1.01097e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A2-LL-n(2)_BLK2repl_17 -0.4949050 3 -15.000 15.000 -10.4270000 OK 0.3686590 -4.77093e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A2-LL-n(2)_BLK2repl_17 6.2730700 3 -15.000 15.000 7.6886400 OK 0.2733390 1.00551e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A2-LL-n(2)_BLK2repl_17 7.3897500 3 -15.000 15.000 5.2776000 OK 0.7983750 1.04218e-06 No_prior NA NA NA OK
Size_DblN_peak_A3-LL-n(3)_BLK2repl_17 139.9800000 2 20.000 199.000 165.9000000 OK 7.6796700 -5.8014e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A3-LL-n(3)_BLK2repl_17 -2.2804500 3 -15.000 15.000 -9.6241100 OK 2.0430900 -6.48179e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A3-LL-n(3)_BLK2repl_17 6.8715400 3 -15.000 15.000 7.2852400 OK 0.3360440 3.33088e-09 No_prior NA NA NA OK
Size_DblN_descend_se_A3-LL-n(3)_BLK2repl_17 6.6719000 3 -15.000 15.000 5.4009300 OK 0.6971830 -1.7418e-06 No_prior NA NA NA OK
Size_DblN_peak_A4-LL-n(4)_BLK2repl_17 114.0130000 2 20.000 199.000 163.8220000 OK 8.8814400 2.21993e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A4-LL-n(4)_BLK2repl_17 -1.9740500 3 -15.000 15.000 -1.8116900 OK 2.8845100 -1.56818e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_A4-LL-n(4)_BLK2repl_17 5.8952200 3 -15.000 15.000 7.5732300 OK 0.6663240 -2.18678e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A4-LL-n(4)_BLK2repl_17 8.4052600 3 -15.000 15.000 6.3611800 OK 1.1773500 -3.06403e-06 No_prior NA NA NA OK
Size_DblN_peak_A5-LL-n(5)_BLK2repl_17 136.4420000 2 20.000 199.000 149.6190000 OK 3.3614200 2.76595e-06 No_prior NA NA NA OK
Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 -10.5928000 3 -15.000 15.000 -10.2978000 OK 64.4313000 7.91946e-08 No_prior NA NA NA OK
Size_DblN_ascend_se_A5-LL-n(5)_BLK2repl_17 6.6313400 3 -15.000 15.000 6.8287000 OK 0.2165100 -1.13768e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A5-LL-n(5)_BLK2repl_17 6.4728000 3 -15.000 15.000 6.3689100 OK 0.3025030 -7.66529e-07 No_prior NA NA NA OK
Size_DblN_peak_A6-LL-n(6)_BLK2repl_17 106.0470000 2 20.000 199.000 120.1350000 OK 7.6868500 -8.84839e-07 No_prior NA NA NA OK
Size_DblN_top_logit_A6-LL-n(6)_BLK2repl_17 -2.3218200 3 -15.000 15.000 -9.4204000 OK 1.2330200 7.94626e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_A6-LL-n(6)_BLK2repl_17 5.2898400 3 -15.000 15.000 6.2344200 OK 0.8057630 1.73087e-06 No_prior NA NA NA OK
Size_DblN_descend_se_A6-LL-n(6)_BLK2repl_17 6.6521200 3 -15.000 15.000 7.0695400 OK 0.3791840 -1.54194e-06 No_prior NA NA NA OK

Table of estimated parameters sorted by parameters with the largest gradients; any parameter with a gradient value with an absolute value above 0.001 (for SS 3.30 models) or a parameter on bounds is colored in red.
file:
parameterchecks.html

label.i label.j corr
2 LnQ_base_EPO-LL-survey-late(25) SR_LN(R0) -0.980628
1 Richards_Fem_GP_1 VonBert_K_Fem_GP_1 -0.975059
6 Size_DblN_ascend_se_A6-LL-n(6)_BLK2repl_17 Size_DblN_peak_A6-LL-n(6)_BLK2repl_17 0.954497
5 Size_DblN_ascend_se_A4-LL-n(4)_BLK2repl_17 Size_DblN_peak_A4-LL-n(4)_BLK2repl_17 0.954661
4 Size_DblN_ascend_se_A4-LL-n(4) Size_DblN_peak_A4-LL-n(4) 0.958679
3 Size_DblN_ascend_se_A2-LL-n(2) Size_DblN_peak_A2-LL-n(2) 0.963793

Table of estimated parameters with the ten highest correlation rates, sorted by highest correlations; any parameter with an absolute value of correlation above is colored in red.
file: correlationcheck.html

name max
198 Size_DblN_top_logit_A4-LL-n(4) 0.00019238
260 Size_DblN_top_logit_A5-LL-n(5)_BLK2repl_17 0.000376893
206 Size_DblN_top_logit_A6-LL-n(6) 0.000534708
187 SizeSpline_GradLo_A1-LL-n(1) 0.000616635
200 Size_DblN_descend_se_A4-LL-n(4) 0.000721537
202 Size_DblN_top_logit_A5-LL-n(5) 0.000895128
182 InitF_seas_1_flt_2A2-LL-n 0.000898811
218 Size_DblN_top_logit_A4-OBJ(15) 0.00116858
210 Size_DblN_top_logit_A2-OBJ(13) 0.00126698
183 InitF_seas_1_flt_14A3-OBJ 0.00142542

Table of estimated parameters with the ten lowest correlation rates, sorted by lowest correlations; any parameter with an absolute value of correlation below is colored in purple
file: lowcorrelationcheck.html