Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file: parameterchecks.html
| Parameter | Value | Phase | Min | Max | Init | Status | Parm_StDev | Gradient | Pr_type | Prior | Pr_SD | Pr_Like | Afterbound |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SD_young_Fem_GP_1 | 4.7432200 | 1 | 0.1 | 10 | 4.600000 | OK | 0.3904390 | 1.59845e-06 | No_prior | NA | NA | NA | OK |
| SR_LN(R0) | 13.3751000 | 1 | 3.0 | 80 | 14.000000 | OK | 0.0175746 | -6.97209e-05 | No_prior | NA | NA | NA | OK |
| SR_regime_BLK1add_36 | 0.2176710 | 2 | -5.0 | 5 | -0.169966 | OK | 0.3623110 | -5.72787e-06 | Normal | 0 | 2.5 | 0.0037905 | OK |
| InitF_seas_1_flt_19F19.DEL.C.inshore | 0.4607600 | 2 | 0.0 | 5 | 0.572327 | OK | 0.1130080 | 4.56028e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19) | 117.3960000 | 3 | 20.0 | 199 | 100.699000 | OK | 2.0046800 | 8.25054e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19) | 6.9800200 | 3 | -5.0 | 15 | 6.667530 | OK | 0.0607477 | -2.56023e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_S1.PS_VAST(33) | 109.6980000 | 3 | 20.0 | 199 | 111.338000 | OK | 0.8251770 | -3.46738e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_S1.PS_VAST(33) | 6.7358300 | 3 | -5.0 | 15 | 6.778810 | OK | 0.0268696 | 7.66207e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 | 104.5330000 | 4 | 20.0 | 199 | 118.284000 | OK | 1.2301600 | -9.09852e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 | 98.1203000 | 4 | 20.0 | 199 | 97.696300 | OK | 2.3477000 | -5.45372e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -0.0623592 | 5 | -15.0 | 15 | 3.298390 | OK | 0.1700250 | -6.11718e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -0.4679350 | 5 | -15.0 | 15 | -1.177340 | OK | 0.5272170 | -3.76339e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | 6.6672500 | 3 | -5.0 | 15 | 7.064780 | OK | 0.0462414 | 1.23976e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | 6.3962800 | 3 | -5.0 | 15 | 6.384350 | OK | 0.1059490 | -4.6382e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | 4.7434300 | 3 | -5.0 | 15 | 4.989830 | OK | 0.7856020 | -9.01074e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | 6.1735000 | 3 | -5.0 | 15 | -4.977450 | OK | 1.1503200 | 1.1603e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -3.6423200 | 5 | -5.0 | 15 | 5.853370 | OK | 2.4699000 | -1.58712e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -4.8111600 | 5 | -5.0 | 15 | 0.401488 | LO | 5.4310400 | 2.67888e-07 | No_prior | NA | NA | NA | OK |
Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html
| label.i | label.j | corr |
|---|---|---|
| Size_DblN_ascend_se_F19.DEL.C.inshore(19) | Size_DblN_peak_F19.DEL.C.inshore(19) | 0.962354 |
| Size_DblN_ascend_se_S1.PS_VAST(33) | Size_DblN_peak_S1.PS_VAST(33) | 0.959844 |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 | 0.953738 |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 | 0.93748 |
| Early_InitAge_4 | SR_regime_BLK1add_36 | -0.921937 |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -0.909757 |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -0.894647 |
| Early_InitAge_2 | SR_regime_BLK1add_36 | -0.884312 |
| Early_InitAge_1 | SR_regime_BLK1add_36 | -0.878509 |
| Early_InitAge_2 | Early_InitAge_4 | 0.873052 |
| Early_InitAge_3 | SR_regime_BLK1add_36 | -0.835795 |
| Early_InitAge_7 | SR_regime_BLK1add_36 | -0.825374 |
| Early_InitAge_1 | Early_InitAge_3 | 0.805571 |
| Early_InitAge_1 | Early_InitAge_4 | 0.787144 |
| Early_InitAge_4 | Early_InitAge_7 | 0.745612 |
| Early_InitAge_2 | Early_InitAge_7 | 0.729153 |
| Early_InitAge_1 | Early_InitAge_7 | 0.725965 |
| Early_InitAge_5 | SR_regime_BLK1add_36 | -0.719634 |
| Early_InitAge_3 | Early_InitAge_5 | 0.715666 |
| Early_InitAge_3 | Early_InitAge_7 | 0.698212 |
| Early_InitAge_5 | Early_InitAge_7 | 0.694173 |
| Main_RecrDev_129 | Main_RecrDev_128 | -0.683171 |
| Main_RecrDev_176 | Main_RecrDev_175 | -0.675255 |
| Main_RecrDev_172 | Main_RecrDev_171 | -0.675005 |
| Main_RecrDev_181 | Main_RecrDev_180 | -0.673973 |
| Main_RecrDev_173 | Main_RecrDev_172 | -0.667862 |
| Main_RecrDev_180 | Main_RecrDev_179 | -0.667153 |
| Main_RecrDev_95 | Main_RecrDev_94 | -0.667082 |
| Main_RecrDev_177 | Main_RecrDev_176 | -0.66422 |
| Main_RecrDev_113 | Main_RecrDev_112 | -0.662763 |
| Main_RecrDev_128 | Main_RecrDev_127 | -0.66265 |
| Main_RecrDev_171 | Main_RecrDev_170 | -0.661784 |
| Main_RecrDev_175 | Main_RecrDev_174 | -0.66154 |
| Main_RecrDev_96 | Main_RecrDev_95 | -0.66123 |
| Main_RecrDev_75 | Main_RecrDev_74 | -0.659433 |
| Main_RecrDev_97 | Main_RecrDev_96 | -0.659289 |
| Main_RecrDev_76 | Main_RecrDev_75 | -0.658948 |
| Main_RecrDev_182 | Main_RecrDev_181 | -0.658444 |
| Main_RecrDev_77 | Main_RecrDev_76 | -0.658372 |
| Main_RecrDev_78 | Main_RecrDev_77 | -0.657616 |
| Main_RecrDev_51 | Main_RecrDev_50 | -0.656653 |
| Main_RecrDev_98 | Main_RecrDev_97 | -0.656465 |
| Main_RecrDev_141 | Main_RecrDev_140 | -0.656007 |
| Main_RecrDev_53 | Main_RecrDev_52 | -0.654545 |
| Main_RecrDev_169 | Main_RecrDev_168 | -0.654266 |
| Main_RecrDev_94 | Main_RecrDev_93 | -0.65258 |
| Early_InitAge_1 | Early_InitAge_5 | 0.650356 |
| Main_RecrDev_50 | Main_RecrDev_49 | -0.650088 |
| Main_RecrDev_178 | Main_RecrDev_177 | -0.649829 |
| Main_RecrDev_174 | Main_RecrDev_173 | -0.649552 |
Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html
| Parameter | max_correlation |
|---|---|
| Early_InitAge_15 | 0.0846723 |
| Early_InitAge_14 | 0.121353 |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | 0.13155 |
| Early_InitAge_13 | 0.187047 |
| Early_InitAge_12 | 0.240207 |
| Main_RecrDev_194 | 0.281843 |
| Early_InitAge_11 | 0.286185 |
| Early_InitAge_10 | 0.286185 |
| Early_InitAge_8 | 0.311928 |
| Main_RecrDev_195 | 0.339563 |
| Main_RecrDev_196 | 0.356735 |
| Early_InitAge_9 | 0.362528 |
| Main_RecrDev_189 | 0.389747 |
| Main_RecrDev_192 | 0.405272 |
| Main_RecrDev_193 | 0.405272 |
| Main_RecrDev_190 | 0.457175 |
| Main_RecrDev_191 | 0.457175 |
| Main_RecrDev_148 | 0.490712 |
| Main_RecrDev_37 | 0.492541 |
| Main_RecrDev_68 | 0.502951 |
| Main_RecrDev_188 | 0.516365 |
| SD_young_Fem_GP_1 | 0.538632 |
| SR_LN(R0) | 0.538632 |
| Main_RecrDev_118 | 0.547439 |
| Main_RecrDev_119 | 0.555591 |
| Main_RecrDev_187 | 0.560923 |
| Main_RecrDev_67 | 0.565813 |
| Main_RecrDev_38 | 0.573797 |
| Main_RecrDev_101 | 0.580582 |
| Main_RecrDev_146 | 0.581704 |
| Main_RecrDev_147 | 0.581704 |
| Main_RecrDev_66 | 0.583376 |
| Main_RecrDev_45 | 0.586183 |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | 0.586958 |
| Main_RecrDev_117 | 0.587145 |
| Main_RecrDev_149 | 0.593686 |
| Main_RecrDev_125 | 0.594652 |
| Main_RecrDev_44 | 0.596245 |
| Main_RecrDev_133 | 0.599593 |
| Main_RecrDev_145 | 0.600572 |
| Main_RecrDev_167 | 0.602288 |
| Main_RecrDev_164 | 0.607087 |
| Main_RecrDev_58 | 0.608425 |
| Main_RecrDev_109 | 0.608552 |
| Main_RecrDev_110 | 0.608552 |
| Main_RecrDev_65 | 0.610784 |
| Main_RecrDev_41 | 0.612086 |
| Main_RecrDev_46 | 0.613486 |
| Main_RecrDev_42 | 0.614672 |
| Main_RecrDev_43 | 0.614672 |