DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
SD_young_Fem_GP_1 4.9774000 1 0.1 10 4.850870 OK 0.4205450 0.000113218 No_prior NA NA NA OK
SR_LN(R0) 12.6340000 1 3.0 80 12.762900 OK 0.0182140 0.0570927 No_prior NA NA NA OK
SR_regime_BLK1add_36 0.2214350 2 -5.0 5 0.387888 OK 0.3612370 -0.000640478 Normal 0 2.5 0.0039227 OK
InitF_seas_1_flt_19F19.DEL.C.inshore 0.5713730 2 0.0 5 0.337916 OK 0.1408140 7.47209e-05 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19) 122.9390000 4 20.0 199 113.135000 OK 2.0837100 0.000408715 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19) 7.1236500 3 -5.0 15 6.878670 OK 0.0592868 -0.00123922 No_prior NA NA NA OK
Size_DblN_peak_S1.PS_VAST(33) 118.2790000 4 20.0 199 113.135000 OK 1.0870700 0.000532762 No_prior NA NA NA OK
Size_DblN_ascend_se_S1.PS_VAST(33) 6.9553900 3 -5.0 15 6.878670 OK 0.0285029 -0.000412282 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 111.4750000 4 20.0 199 104.447000 OK 1.3578400 -0.000196381 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 103.9450000 4 20.0 199 108.384000 OK 2.4131900 0.000338401 No_prior NA NA NA OK
Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 2.7053000 5 -15.0 15 -0.378694 OK 188.2820000 0.000169764 No_prior NA NA NA OK
Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -0.0111316 5 -15.0 15 -0.806108 OK 0.4309750 0.000486376 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 6.8517800 3 -5.0 15 6.696630 OK 0.0443443 0.000946933 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 6.5603600 3 -5.0 15 6.704580 OK 0.0983158 -0.000533901 No_prior NA NA NA OK
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 5.0609400 3 -5.0 15 5.084270 OK 219.4800000 3.70532e-06 No_prior NA NA NA OK
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 4.6906000 3 -5.0 15 5.611720 OK 2.0574000 0.000139394 No_prior NA NA NA OK
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 5.6183300 5 -5.0 15 -4.992300 OK 201.9930000 -1.76599e-07 No_prior NA NA NA OK
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -3.1731800 5 -5.0 15 -4.983180 OK 3.9045200 -5.71568e-07 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
Size_DblN_ascend_se_S1.PS_VAST(33) Size_DblN_peak_S1.PS_VAST(33) 0.965712
Size_DblN_ascend_se_F19.DEL.C.inshore(19) Size_DblN_peak_F19.DEL.C.inshore(19) 0.963804
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 0.955049
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 0.940867
Early_InitAge_4 SR_regime_BLK1add_36 -0.919606
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -0.907102
Early_InitAge_2 SR_regime_BLK1add_36 -0.881254
Early_InitAge_1 SR_regime_BLK1add_36 -0.871838
Early_InitAge_2 Early_InitAge_4 0.871223
Early_InitAge_3 SR_regime_BLK1add_36 -0.830806
Early_InitAge_7 SR_regime_BLK1add_36 -0.826954
Early_InitAge_1 Early_InitAge_3 0.800064
Early_InitAge_1 Early_InitAge_4 0.776867
Early_InitAge_4 Early_InitAge_7 0.745365
Early_InitAge_2 Early_InitAge_7 0.72784
Early_InitAge_1 Early_InitAge_7 0.72091
Early_InitAge_3 Early_InitAge_5 0.697108
Early_InitAge_5 SR_regime_BLK1add_36 -0.694644
Early_InitAge_3 Early_InitAge_7 0.693313
Main_RecrDev_129 Main_RecrDev_128 -0.680689
Main_RecrDev_75 Main_RecrDev_74 -0.680085
Main_RecrDev_76 Main_RecrDev_75 -0.676634
Early_InitAge_5 Early_InitAge_7 0.675994
Main_RecrDev_181 Main_RecrDev_180 -0.675668
Main_RecrDev_88 Main_RecrDev_87 -0.674849
Main_RecrDev_98 Main_RecrDev_97 -0.674772
Main_RecrDev_78 Main_RecrDev_77 -0.674235
Main_RecrDev_176 Main_RecrDev_175 -0.673197
Main_RecrDev_77 Main_RecrDev_76 -0.672271
Main_RecrDev_51 Main_RecrDev_50 -0.670581
Main_RecrDev_57 Main_RecrDev_56 -0.670226
Main_RecrDev_113 Main_RecrDev_112 -0.670203
Main_RecrDev_53 Main_RecrDev_52 -0.668938
Main_RecrDev_180 Main_RecrDev_179 -0.668401
Main_RecrDev_97 Main_RecrDev_96 -0.6668
Main_RecrDev_141 Main_RecrDev_140 -0.666493
Main_RecrDev_135 Main_RecrDev_134 -0.666405
Main_RecrDev_48 Main_RecrDev_47 -0.666117
Main_RecrDev_83 Main_RecrDev_82 -0.66607
Main_RecrDev_49 Main_RecrDev_48 -0.665758
Main_RecrDev_50 Main_RecrDev_49 -0.665743
Main_RecrDev_90 Main_RecrDev_89 -0.665235
Main_RecrDev_99 Main_RecrDev_98 -0.665094
Main_RecrDev_175 Main_RecrDev_174 -0.662659
Main_RecrDev_105 Main_RecrDev_104 -0.662464
Main_RecrDev_173 Main_RecrDev_172 -0.662383
Main_RecrDev_177 Main_RecrDev_176 -0.661707
Main_RecrDev_136 Main_RecrDev_135 -0.661559
Main_RecrDev_89 Main_RecrDev_88 -0.661499
Main_RecrDev_172 Main_RecrDev_171 -0.66131

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Early_InitAge_15 0.0915697
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 0.108601
Early_InitAge_14 0.14482
Early_InitAge_13 0.224252
Main_RecrDev_194 0.255484
Early_InitAge_10 0.275704
Early_InitAge_12 0.283094
Early_InitAge_11 0.302705
Early_InitAge_8 0.315289
Main_RecrDev_195 0.322188
Main_RecrDev_196 0.344211
Early_InitAge_9 0.36151
Main_RecrDev_189 0.369431
Main_RecrDev_192 0.382624
Main_RecrDev_193 0.382624
Main_RecrDev_190 0.444527
Main_RecrDev_191 0.444527
Main_RecrDev_188 0.478513
Main_RecrDev_148 0.484454
Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 0.496407
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 0.496407
Main_RecrDev_68 0.512065
Main_RecrDev_37 0.513531
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 0.526178
Main_RecrDev_187 0.55276
Main_RecrDev_118 0.553762
Main_RecrDev_119 0.569566
Main_RecrDev_101 0.569986
Main_RecrDev_164 0.580639
Main_RecrDev_167 0.583181
SD_young_Fem_GP_1 0.584865
SR_LN(R0) 0.584865
Main_RecrDev_117 0.587604
Main_RecrDev_67 0.588511
Main_RecrDev_38 0.59171
InitF_seas_1_flt_19F19.DEL.C.inshore 0.597012
Main_RecrDev_66 0.597219
Main_RecrDev_125 0.598537
Main_RecrDev_146 0.602888
Main_RecrDev_147 0.602888
Main_RecrDev_145 0.604018
Main_RecrDev_133 0.604295
Main_RecrDev_45 0.609472
Main_RecrDev_149 0.610841
Main_RecrDev_165 0.615821
Main_RecrDev_166 0.615821
Main_RecrDev_110 0.616769
Main_RecrDev_109 0.624741
Main_RecrDev_69 0.627551
Main_RecrDev_39 0.628478